Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.18■□□□□ 0.02
H2afb1S4R1E0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
H2afb1S4R1E0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Gm13216-201ENSMUST00000117145 591 ntBASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb1S4R1E0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Gm37856-201ENSMUST00000191634 999 ntBASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Gm43183-201ENSMUST00000200632 547 ntBASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb1S4R1E0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.15■□□□□ 0.02
H2afb1S4R1E0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb1S4R1E0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms