Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a2Q9JLR1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Sec61a2Q9JLR1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a2Q9JLR1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sec61a2Q9JLR1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms