Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Gm27000-201ENSMUST00000182943 842 ntBASIC16.73■□□□□ 0.27
Vps35Q9EQH3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.73■□□□□ 0.27
Vps35Q9EQH3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps35Q9EQH3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.72■□□□□ 0.27
Vps35Q9EQH3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps35Q9EQH3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps35Q9EQH3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vps35Q9EQH3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps35Q9EQH3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Mir1668-201ENSMUST00000184114 107 ntBASIC16.69■□□□□ 0.26
Vps35Q9EQH3 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps35Q9EQH3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms