Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Haglr-201ENSMUST00000100000 2085 ntBASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Gm7213-201ENSMUST00000215977 950 ntBASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp48Q9D361 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Gm18115-201ENSMUST00000221209 621 ntBASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp48Q9D361 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp48Q9D361 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp48Q9D361 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snrnp48Q9D361 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snrnp48Q9D361 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snrnp48Q9D361 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms