Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Tgds-204ENSMUST00000228543 1594 ntBASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col25a1Q99MQ5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.29■□□□□ 0.36
Col25a1Q99MQ5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col25a1Q99MQ5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Gm27867-201ENSMUST00000184778 125 ntBASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Col25a1Q99MQ5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col25a1Q99MQ5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col25a1Q99MQ5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col25a1Q99MQ5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms