Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.22■□□□□ 0.19
Rnf111Q99ML9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf111Q99ML9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf111Q99ML9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf111Q99ML9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Gm715-201ENSMUST00000117865 831 ntBASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Gm24841-201ENSMUST00000158676 357 ntBASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf111Q99ML9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.19■□□□□ 0.18
Rnf111Q99ML9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms