Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Haglr-201ENSMUST00000100000 2085 ntBASIC14.64□□□□□ -0.07
Scrt1Q99M85 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Gm43347-201ENSMUST00000200226 580 ntBASIC14.64□□□□□ -0.07
Scrt1Q99M85 Gm29791-202ENSMUST00000207888 369 ntBASIC14.64□□□□□ -0.07
Scrt1Q99M85 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.64□□□□□ -0.07
Scrt1Q99M85 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Scrt1Q99M85 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.63□□□□□ -0.07
Scrt1Q99M85 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Scrt1Q99M85 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scrt1Q99M85 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.62□□□□□ -0.07
Scrt1Q99M85 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Gm15794-201ENSMUST00000120182 631 ntBASIC14.62□□□□□ -0.07
Scrt1Q99M85 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Gm27525-201ENSMUST00000184465 107 ntBASIC14.62□□□□□ -0.07
Scrt1Q99M85 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Scrt1Q99M85 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Gm10418-201ENSMUST00000100943 576 ntBASIC14.61□□□□□ -0.07
Scrt1Q99M85 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Scrt1Q99M85 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms