Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Usp11Q99K46 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp11Q99K46 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp11Q99K46 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp11Q99K46 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Haglr-201ENSMUST00000100000 2085 ntBASIC17.64■□□□□ 0.41
Usp11Q99K46 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp11Q99K46 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.64■□□□□ 0.41
Usp11Q99K46 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.64■□□□□ 0.41
Usp11Q99K46 Gm12085-201ENSMUST00000119263 940 ntBASIC17.64■□□□□ 0.41
Usp11Q99K46 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp11Q99K46 Gm24841-201ENSMUST00000158676 357 ntBASIC17.64■□□□□ 0.41
Usp11Q99K46 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.64■□□□□ 0.41
Usp11Q99K46 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Usp11Q99K46 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.64■□□□□ 0.41
Usp11Q99K46 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp11Q99K46 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp11Q99K46 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp11Q99K46 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Usp11Q99K46 Mir6982-201ENSMUST00000184354 68 ntBASIC17.63■□□□□ 0.41
Usp11Q99K46 Gm3375-201ENSMUST00000203929 796 ntBASIC17.63■□□□□ 0.41
Usp11Q99K46 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp11Q99K46 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.63■□□□□ 0.41
Usp11Q99K46 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp11Q99K46 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp11Q99K46 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp11Q99K46 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Usp11Q99K46 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp11Q99K46 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp11Q99K46 Gm5417-201ENSMUST00000079706 384 ntBASIC17.62■□□□□ 0.41
Usp11Q99K46 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.62■□□□□ 0.41
Usp11Q99K46 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp11Q99K46 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp11Q99K46 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Usp11Q99K46 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp11Q99K46 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Gm38027-201ENSMUST00000192315 235 ntBASIC17.61■□□□□ 0.41
Usp11Q99K46 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Usp11Q99K46 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp11Q99K46 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp11Q99K46 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp11Q99K46 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Usp11Q99K46 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp11Q99K46 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp11Q99K46 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.6■□□□□ 0.41
Usp11Q99K46 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms