Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.98□□□□□ -0.01
Odf4Q8VI88 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Odf4Q8VI88 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.97□□□□□ -0.01
Odf4Q8VI88 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Odf4Q8VI88 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Odf3b-204ENSMUST00000227834 930 ntBASIC14.97□□□□□ -0.01
Odf4Q8VI88 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.97□□□□□ -0.01
Odf4Q8VI88 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Odf4Q8VI88 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.96□□□□□ -0.01
Odf4Q8VI88 Gm11539-201ENSMUST00000119837 557 ntBASIC14.96□□□□□ -0.01
Odf4Q8VI88 Gm13436-201ENSMUST00000120418 567 ntBASIC14.96□□□□□ -0.01
Odf4Q8VI88 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Gm10231-201ENSMUST00000181584 441 ntBASIC14.96□□□□□ -0.01
Odf4Q8VI88 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Gm10175-202ENSMUST00000208752 441 ntBASIC14.96□□□□□ -0.01
Odf4Q8VI88 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.96□□□□□ -0.01
Odf4Q8VI88 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Odf4Q8VI88 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Odf4Q8VI88 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Odf4Q8VI88 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Odf4Q8VI88 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Odf4Q8VI88 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Odf4Q8VI88 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.95□□□□□ -0.02
Odf4Q8VI88 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms