Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upb1Q8VC97 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upb1Q8VC97 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upb1Q8VC97 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upb1Q8VC97 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upb1Q8VC97 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Upb1Q8VC97 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.14■□□□□ 0.49
Upb1Q8VC97 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.14■□□□□ 0.49
Upb1Q8VC97 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upb1Q8VC97 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Upb1Q8VC97 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Gm15794-201ENSMUST00000120182 631 ntBASIC18.12■□□□□ 0.49
Upb1Q8VC97 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Gm27357-201ENSMUST00000183754 135 ntBASIC18.12■□□□□ 0.49
Upb1Q8VC97 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.12■□□□□ 0.49
Upb1Q8VC97 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upb1Q8VC97 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Mir3081-201ENSMUST00000175305 84 ntBASIC18.11■□□□□ 0.49
Upb1Q8VC97 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upb1Q8VC97 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Gm18669-201ENSMUST00000216049 778 ntBASIC18.1■□□□□ 0.49
Upb1Q8VC97 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upb1Q8VC97 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.1■□□□□ 0.49
Upb1Q8VC97 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upb1Q8VC97 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upb1Q8VC97 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upb1Q8VC97 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upb1Q8VC97 Olfr129-201ENSMUST00000122318 993 ntBASIC18.09■□□□□ 0.49
Upb1Q8VC97 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upb1Q8VC97 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms