Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Gm18958-201ENSMUST00000174258 762 ntBASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.02■□□□□ 0.16
Lsm1Q8VC85 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm1Q8VC85 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm1Q8VC85 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm1Q8VC85 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.02■□□□□ 0.15
Lsm1Q8VC85 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm1Q8VC85 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm1Q8VC85 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Lsm1Q8VC85 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
Lsm1Q8VC85 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16■□□□□ 0.15
Lsm1Q8VC85 Gm5297-201ENSMUST00000198555 1171 ntBASIC16■□□□□ 0.15
Lsm1Q8VC85 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm1Q8VC85 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16■□□□□ 0.15
Lsm1Q8VC85 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Odf3b-204ENSMUST00000227834 930 ntBASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Lsm1Q8VC85 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms