Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Gm24841-201ENSMUST00000158676 357 ntBASIC17.91■□□□□ 0.46
Nup58Q8R332 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Gm37055-201ENSMUST00000191866 133 ntBASIC17.91■□□□□ 0.46
Nup58Q8R332 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.91■□□□□ 0.46
Nup58Q8R332 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup58Q8R332 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Nup58Q8R332 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nup58Q8R332 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Gm13836-201ENSMUST00000121159 501 ntBASIC17.9■□□□□ 0.46
Nup58Q8R332 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Nup58Q8R332 Gm37292-201ENSMUST00000192062 758 ntBASIC17.9■□□□□ 0.46
Nup58Q8R332 Gm10517-202ENSMUST00000192970 758 ntBASIC17.9■□□□□ 0.46
Nup58Q8R332 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nup58Q8R332 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup58Q8R332 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nup58Q8R332 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Gm12382-201ENSMUST00000122005 922 ntBASIC17.89■□□□□ 0.45
Nup58Q8R332 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.89■□□□□ 0.45
Nup58Q8R332 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nup58Q8R332 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.89■□□□□ 0.45
Nup58Q8R332 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup58Q8R332 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.88■□□□□ 0.45
Nup58Q8R332 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nup58Q8R332 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nup58Q8R332 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nup58Q8R332 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.88■□□□□ 0.45
Nup58Q8R332 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.88■□□□□ 0.45
Nup58Q8R332 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup58Q8R332 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Nup58Q8R332 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Nup58Q8R332 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nup58Q8R332 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup58Q8R332 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms