Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Gm24589-201ENSMUST00000116692 94 ntBASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Zcchc9Q8R1J3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zcchc9Q8R1J3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Zcchc9Q8R1J3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zcchc9Q8R1J3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Gm44771-201ENSMUST00000206975 626 ntBASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zcchc9Q8R1J3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Mir8112-201ENSMUST00000184382 131 ntBASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms