Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco1Q8CEZ1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Nespas-201ENSMUST00000143738 1083 ntBASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco1Q8CEZ1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Gm13241-201ENSMUST00000094493 780 ntBASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco1Q8CEZ1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Gm43017-201ENSMUST00000198296 752 ntBASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco1Q8CEZ1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Mir2861-201ENSMUST00000175539 82 ntBASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Gm21956-201ENSMUST00000179946 522 ntBASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms