Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Ank2-226ENSMUST00000189368 339 ntBASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps53Q8CCB4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps53Q8CCB4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Gm16061-201ENSMUST00000122167 857 ntBASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps53Q8CCB4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps53Q8CCB4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps53Q8CCB4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps53Q8CCB4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms