Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Gm3375-201ENSMUST00000203929 796 ntBASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trerf1Q8BXJ2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Trerf1Q8BXJ2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.61■□□□□ 0.41
Trerf1Q8BXJ2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Gm30025-201ENSMUST00000218555 728 ntBASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trerf1Q8BXJ2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trerf1Q8BXJ2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trerf1Q8BXJ2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms