Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Snrnp40Q6PE01 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Gm11779-201ENSMUST00000118541 368 ntBASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Snrnp40Q6PE01 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Snrnp40Q6PE01 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Gm25745-201ENSMUST00000174945 133 ntBASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Snrnp40Q6PE01 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Snrnp40Q6PE01 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms