Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd4Q6PDQ2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Gm6858-201ENSMUST00000208582 1468 ntBASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd4Q6PDQ2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Gm1401-201ENSMUST00000122048 772 ntBASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd4Q6PDQ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Gm11779-201ENSMUST00000118541 368 ntBASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Chd4Q6PDQ2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd4Q6PDQ2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Gm6550-201ENSMUST00000187574 993 ntBASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd4Q6PDQ2 Gm7862-201ENSMUST00000121461 292 ntBASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Gm4535-201ENSMUST00000182274 558 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms