Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.83□□□□□ -0.36
Notch3Q61982 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.82□□□□□ -0.36
Notch3Q61982 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Notch3Q61982 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Notch3Q61982 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Notch3Q61982 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.82□□□□□ -0.36
Notch3Q61982 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Notch3Q61982 Gm27357-201ENSMUST00000183754 135 ntBASIC12.82□□□□□ -0.36
Notch3Q61982 Gm27742-201ENSMUST00000184667 60 ntBASIC12.82□□□□□ -0.36
Notch3Q61982 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.82□□□□□ -0.36
Notch3Q61982 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Notch3Q61982 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.82□□□□□ -0.36
Notch3Q61982 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.82□□□□□ -0.36
Notch3Q61982 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Notch3Q61982 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.82□□□□□ -0.36
Notch3Q61982 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Notch3Q61982 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Gm10418-201ENSMUST00000100943 576 ntBASIC12.81□□□□□ -0.36
Notch3Q61982 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.81□□□□□ -0.36
Notch3Q61982 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.81□□□□□ -0.36
Notch3Q61982 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Notch3Q61982 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Notch3Q61982 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Notch3Q61982 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Notch3Q61982 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC12.81□□□□□ -0.36
Notch3Q61982 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Notch3Q61982 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.8□□□□□ -0.36
Notch3Q61982 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.8□□□□□ -0.36
Notch3Q61982 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Notch3Q61982 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Notch3Q61982 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Notch3Q61982 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.8□□□□□ -0.36
Notch3Q61982 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.8□□□□□ -0.36
Notch3Q61982 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.8□□□□□ -0.36
Notch3Q61982 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.8□□□□□ -0.36
Notch3Q61982 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Gm37025-201ENSMUST00000195159 829 ntBASIC12.8□□□□□ -0.36
Notch3Q61982 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.8□□□□□ -0.36
Notch3Q61982 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.8□□□□□ -0.36
Notch3Q61982 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Notch3Q61982 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Notch3Q61982 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Notch3Q61982 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Notch3Q61982 Gm24589-201ENSMUST00000116692 94 ntBASIC12.79□□□□□ -0.36
Notch3Q61982 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms