Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Gm12350-201ENSMUST00000121208 462 ntBASIC18.3■□□□□ 0.52
Cln3Q61124 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.3■□□□□ 0.52
Cln3Q61124 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Cln3Q61124 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.3■□□□□ 0.52
Cln3Q61124 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Gm25745-201ENSMUST00000174945 133 ntBASIC18.29■□□□□ 0.52
Cln3Q61124 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.29■□□□□ 0.52
Cln3Q61124 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.29■□□□□ 0.52
Cln3Q61124 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cln3Q61124 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.29■□□□□ 0.52
Cln3Q61124 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.29■□□□□ 0.52
Cln3Q61124 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.29■□□□□ 0.52
Cln3Q61124 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cln3Q61124 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln3Q61124 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.28■□□□□ 0.52
Cln3Q61124 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cln3Q61124 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cln3Q61124 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Gm7506-201ENSMUST00000207758 815 ntBASIC18.28■□□□□ 0.52
Cln3Q61124 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.28■□□□□ 0.52
Cln3Q61124 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln3Q61124 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Cln3Q61124 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.27■□□□□ 0.52
Cln3Q61124 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cln3Q61124 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.27■□□□□ 0.52
Cln3Q61124 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.27■□□□□ 0.52
Cln3Q61124 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.27■□□□□ 0.52
Cln3Q61124 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln3Q61124 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cln3Q61124 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cln3Q61124 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cln3Q61124 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cln3Q61124 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cln3Q61124 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.26■□□□□ 0.51
Cln3Q61124 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cln3Q61124 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln3Q61124 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln3Q61124 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cln3Q61124 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln3Q61124 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln3Q61124 Gm25925-201ENSMUST00000158314 306 ntBASIC18.25■□□□□ 0.51
Cln3Q61124 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.25■□□□□ 0.51
Cln3Q61124 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.25■□□□□ 0.51
Cln3Q61124 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln3Q61124 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms