Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-4Q5R1H9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Gm13401-201ENSMUST00000117074 291 ntBASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Gm9988-201ENSMUST00000069786 435 ntBASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-4Q5R1H9 Reep4-203ENSMUST00000226563 1444 ntBASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Gm38285-201ENSMUST00000192928 922 ntBASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms