Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Gm13474-201ENSMUST00000122466 815 ntBASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rnf20Q5DTM8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rnf20Q5DTM8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Gm11539-201ENSMUST00000119837 557 ntBASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Gm13436-201ENSMUST00000120418 567 ntBASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Gm16061-201ENSMUST00000122167 857 ntBASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf20Q5DTM8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rnf20Q5DTM8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Gm7370-201ENSMUST00000219471 767 ntBASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf20Q5DTM8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf20Q5DTM8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms