Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Gm27357-201ENSMUST00000183754 135 ntBASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp4Q3U4B1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Gm28033-201ENSMUST00000184224 96 ntBASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Gm29707-201ENSMUST00000196325 491 ntBASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp4Q3U4B1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Gm44450-201ENSMUST00000199528 114 ntBASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssbp4Q3U4B1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp4Q3U4B1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Gm17971-201ENSMUST00000190239 806 ntBASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Gm18421-201ENSMUST00000204122 625 ntBASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp4Q3U4B1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp4Q3U4B1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp4Q3U4B1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms