Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Birc2-201ENSMUST00000054878 378 ntBASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lins1Q3U1D0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lins1Q3U1D0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lins1Q3U1D0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lins1Q3U1D0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Lins1Q3U1D0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lins1Q3U1D0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lins1Q3U1D0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lins1Q3U1D0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lins1Q3U1D0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lins1Q3U1D0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lins1Q3U1D0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.81■□□□□ 0.76
Lins1Q3U1D0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.81■□□□□ 0.76
Lins1Q3U1D0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Lins1Q3U1D0 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.81■□□□□ 0.76
Lins1Q3U1D0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms