Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Six5P70178 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Six5P70178 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Gm13186-201ENSMUST00000118031 316 ntBASIC15.65■□□□□ 0.1
Six5P70178 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.65■□□□□ 0.1
Six5P70178 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Six5P70178 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Six5P70178 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six5P70178 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Six5P70178 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Six5P70178 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Six5P70178 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.64■□□□□ 0.09
Six5P70178 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Six5P70178 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.64■□□□□ 0.09
Six5P70178 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Six5P70178 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Six5P70178 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six5P70178 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Six5P70178 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Actl10-202ENSMUST00000226583 1501 ntBASIC15.63■□□□□ 0.09
Six5P70178 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.63■□□□□ 0.09
Six5P70178 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.63■□□□□ 0.09
Six5P70178 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.63■□□□□ 0.09
Six5P70178 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.63■□□□□ 0.09
Six5P70178 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Six5P70178 Gm7213-201ENSMUST00000215977 950 ntBASIC15.63■□□□□ 0.09
Six5P70178 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.63■□□□□ 0.09
Six5P70178 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.63■□□□□ 0.09
Six5P70178 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Six5P70178 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.63■□□□□ 0.09
Six5P70178 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.63■□□□□ 0.09
Six5P70178 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Six5P70178 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Six5P70178 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.63■□□□□ 0.09
Six5P70178 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six5P70178 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Six5P70178 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.62■□□□□ 0.09
Six5P70178 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Six5P70178 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Gm18115-201ENSMUST00000221209 621 ntBASIC15.62■□□□□ 0.09
Six5P70178 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six5P70178 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Six5P70178 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms