Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sec61a1P61620 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.74□□□□□ -0.05
Sec61a1P61620 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sec61a1P61620 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.74□□□□□ -0.05
Sec61a1P61620 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.74□□□□□ -0.05
Sec61a1P61620 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Sec61a1P61620 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.74□□□□□ -0.05
Sec61a1P61620 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.73□□□□□ -0.05
Sec61a1P61620 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a1P61620 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.73□□□□□ -0.05
Sec61a1P61620 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Mir7071-201ENSMUST00000184847 69 ntBASIC14.72□□□□□ -0.05
Sec61a1P61620 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.72□□□□□ -0.05
Sec61a1P61620 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.72□□□□□ -0.05
Sec61a1P61620 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a1P61620 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a1P61620 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a1P61620 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a1P61620 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms