Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cks1bP61025 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Cks1bP61025 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cks1bP61025 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Reep4-203ENSMUST00000226563 1444 ntBASIC11.96□□□□□ -0.49
Cks1bP61025 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Cks1bP61025 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.96□□□□□ -0.49
Cks1bP61025 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.96□□□□□ -0.49
Cks1bP61025 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cks1bP61025 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1bP61025 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1bP61025 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1bP61025 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cks1bP61025 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.96□□□□□ -0.5
Cks1bP61025 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1bP61025 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1bP61025 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cks1bP61025 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1bP61025 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1bP61025 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1bP61025 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Gm38345-201ENSMUST00000192635 1748 ntBASIC11.95□□□□□ -0.5
Cks1bP61025 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.95□□□□□ -0.5
Cks1bP61025 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.95□□□□□ -0.5
Cks1bP61025 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cks1bP61025 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cks1bP61025 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cks1bP61025 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.94□□□□□ -0.5
Cks1bP61025 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cks1bP61025 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cks1bP61025 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.94□□□□□ -0.5
Cks1bP61025 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cks1bP61025 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.94□□□□□ -0.5
Cks1bP61025 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cks1bP61025 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.94□□□□□ -0.5
Cks1bP61025 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Cks1bP61025 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.94□□□□□ -0.5
Cks1bP61025 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cks1bP61025 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cks1bP61025 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.93□□□□□ -0.5
Cks1bP61025 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cks1bP61025 Gm13146-201ENSMUST00000118508 780 ntBASIC11.93□□□□□ -0.5
Cks1bP61025 Gm13534-201ENSMUST00000121169 513 ntBASIC11.93□□□□□ -0.5
Cks1bP61025 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cks1bP61025 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cks1bP61025 Gm42778-201ENSMUST00000199644 553 ntBASIC11.93□□□□□ -0.5
Cks1bP61025 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms