Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.7■□□□□ 0.58
Tpm1P58771 Mir5133-201ENSMUST00000174955 77 ntBASIC18.7■□□□□ 0.58
Tpm1P58771 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Gm42569-201ENSMUST00000200539 472 ntBASIC18.7■□□□□ 0.58
Tpm1P58771 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.7■□□□□ 0.58
Tpm1P58771 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.7■□□□□ 0.58
Tpm1P58771 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.69■□□□□ 0.58
Tpm1P58771 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.69■□□□□ 0.58
Tpm1P58771 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Tpm1P58771 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.69■□□□□ 0.58
Tpm1P58771 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm1P58771 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.68■□□□□ 0.58
Tpm1P58771 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Tpm1P58771 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.68■□□□□ 0.58
Tpm1P58771 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.68■□□□□ 0.58
Tpm1P58771 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Gm4968-201ENSMUST00000071458 858 ntBASIC18.68■□□□□ 0.58
Tpm1P58771 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.68■□□□□ 0.58
Tpm1P58771 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.68■□□□□ 0.58
Tpm1P58771 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tpm1P58771 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm1P58771 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Gm10849-201ENSMUST00000100397 618 ntBASIC18.67■□□□□ 0.58
Tpm1P58771 Gm15375-201ENSMUST00000119510 849 ntBASIC18.67■□□□□ 0.58
Tpm1P58771 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.67■□□□□ 0.58
Tpm1P58771 Gm5408-201ENSMUST00000197998 747 ntBASIC18.67■□□□□ 0.58
Tpm1P58771 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tpm1P58771 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm1P58771 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tpm1P58771 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.66■□□□□ 0.58
Tpm1P58771 Gm13148-201ENSMUST00000118892 745 ntBASIC18.66■□□□□ 0.58
Tpm1P58771 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tpm1P58771 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.66■□□□□ 0.58
Tpm1P58771 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm1P58771 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms