Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.99■□□□□ 0.15
Sox3P53784 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox3P53784 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sox3P53784 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sox3P53784 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
Sox3P53784 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Sox3P53784 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.98■□□□□ 0.15
Sox3P53784 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.98■□□□□ 0.15
Sox3P53784 Gm11950-201ENSMUST00000121615 838 ntBASIC15.98■□□□□ 0.15
Sox3P53784 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.98■□□□□ 0.15
Sox3P53784 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.98■□□□□ 0.15
Sox3P53784 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.98■□□□□ 0.15
Sox3P53784 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.98■□□□□ 0.15
Sox3P53784 Idnk-204ENSMUST00000226010 1898 ntBASIC15.98■□□□□ 0.15
Sox3P53784 Birc2-201ENSMUST00000054878 378 ntBASIC15.98■□□□□ 0.15
Sox3P53784 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Sox3P53784 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Sox3P53784 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Sox3P53784 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.98■□□□□ 0.15
Sox3P53784 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Sox3P53784 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox3P53784 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox3P53784 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sox3P53784 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox3P53784 Gm27742-201ENSMUST00000184667 60 ntBASIC15.97■□□□□ 0.15
Sox3P53784 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox3P53784 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.96■□□□□ 0.15
Sox3P53784 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.96■□□□□ 0.15
Sox3P53784 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sox3P53784 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.96■□□□□ 0.15
Sox3P53784 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.96■□□□□ 0.15
Sox3P53784 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sox3P53784 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox3P53784 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.96■□□□□ 0.15
Sox3P53784 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sox3P53784 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Sox3P53784 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sox3P53784 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sox3P53784 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.95■□□□□ 0.14
Sox3P53784 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sox3P53784 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Gm7791-201ENSMUST00000219066 539 ntBASIC15.95■□□□□ 0.14
Sox3P53784 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sox3P53784 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.95■□□□□ 0.14
Sox3P53784 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox3P53784 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sox3P53784 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.94■□□□□ 0.14
Sox3P53784 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.94■□□□□ 0.14
Sox3P53784 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms