Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.54■□□□□ 0.24
Pdx1P52946 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.54■□□□□ 0.24
Pdx1P52946 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.54■□□□□ 0.24
Pdx1P52946 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.54■□□□□ 0.24
Pdx1P52946 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pdx1P52946 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.54■□□□□ 0.24
Pdx1P52946 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pdx1P52946 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pdx1P52946 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdx1P52946 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.53■□□□□ 0.24
Pdx1P52946 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pdx1P52946 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Gm22697-201ENSMUST00000175194 63 ntBASIC16.53■□□□□ 0.24
Pdx1P52946 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.53■□□□□ 0.24
Pdx1P52946 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pdx1P52946 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pdx1P52946 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pdx1P52946 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pdx1P52946 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Pdx1P52946 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdx1P52946 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.52■□□□□ 0.24
Pdx1P52946 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdx1P52946 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdx1P52946 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pdx1P52946 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Gm26039-201ENSMUST00000158152 144 ntBASIC16.52■□□□□ 0.24
Pdx1P52946 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.52■□□□□ 0.24
Pdx1P52946 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdx1P52946 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdx1P52946 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pdx1P52946 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pdx1P52946 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdx1P52946 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdx1P52946 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdx1P52946 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.51■□□□□ 0.23
Pdx1P52946 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.51■□□□□ 0.23
Pdx1P52946 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pdx1P52946 Gm13836-201ENSMUST00000121159 501 ntBASIC16.51■□□□□ 0.23
Pdx1P52946 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.51■□□□□ 0.23
Pdx1P52946 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.51■□□□□ 0.23
Pdx1P52946 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.51■□□□□ 0.23
Pdx1P52946 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pdx1P52946 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pdx1P52946 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pdx1P52946 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms