Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Gm17661-201ENSMUST00000170317 270 ntBASIC14.26□□□□□ -0.13
Hmga2P52927 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Gm26571-201ENSMUST00000181399 666 ntBASIC14.26□□□□□ -0.13
Hmga2P52927 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmga2P52927 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmga2P52927 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmga2P52927 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmga2P52927 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
Hmga2P52927 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmga2P52927 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Hmga2P52927 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmga2P52927 Mir5133-201ENSMUST00000174955 77 ntBASIC14.25□□□□□ -0.13
Hmga2P52927 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.25□□□□□ -0.13
Hmga2P52927 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmga2P52927 Gm18025-201ENSMUST00000221733 862 ntBASIC14.25□□□□□ -0.13
Hmga2P52927 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga2P52927 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.24□□□□□ -0.13
Hmga2P52927 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.24□□□□□ -0.13
Hmga2P52927 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmga2P52927 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Hmga2P52927 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hmga2P52927 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmga2P52927 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmga2P52927 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga2P52927 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmga2P52927 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hmga2P52927 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmga2P52927 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmga2P52927 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Gm11249-201ENSMUST00000117071 859 ntBASIC14.23□□□□□ -0.13
Hmga2P52927 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmga2P52927 Gm8495-201ENSMUST00000188740 694 ntBASIC14.23□□□□□ -0.13
Hmga2P52927 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmga2P52927 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmga2P52927 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.23□□□□□ -0.13
Hmga2P52927 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmga2P52927 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Hmga2P52927 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmga2P52927 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga2P52927 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga2P52927 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmga2P52927 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga2P52927 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms