Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.9□□□□□ -0.18
Nkx2-1P50220 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.9□□□□□ -0.18
Nkx2-1P50220 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-1P50220 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx2-1P50220 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-1P50220 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Gm11643-201ENSMUST00000119578 864 ntBASIC13.87□□□□□ -0.19
Nkx2-1P50220 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Gm37179-201ENSMUST00000194862 823 ntBASIC13.87□□□□□ -0.19
Nkx2-1P50220 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx2-1P50220 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms