Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.96□□□□□ -0.17
Col8a2P25318 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Col8a2P25318 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.96□□□□□ -0.17
Col8a2P25318 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col8a2P25318 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.96□□□□□ -0.17
Col8a2P25318 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col8a2P25318 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col8a2P25318 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col8a2P25318 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col8a2P25318 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col8a2P25318 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col8a2P25318 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Col8a2P25318 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col8a2P25318 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Col8a2P25318 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Col8a2P25318 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col8a2P25318 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col8a2P25318 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Col8a2P25318 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.95□□□□□ -0.18
Col8a2P25318 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.95□□□□□ -0.18
Col8a2P25318 Gm11950-201ENSMUST00000121615 838 ntBASIC13.95□□□□□ -0.18
Col8a2P25318 Olfr129-201ENSMUST00000122318 993 ntBASIC13.95□□□□□ -0.18
Col8a2P25318 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.95□□□□□ -0.18
Col8a2P25318 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col8a2P25318 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.95□□□□□ -0.18
Col8a2P25318 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.95□□□□□ -0.18
Col8a2P25318 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.95□□□□□ -0.18
Col8a2P25318 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col8a2P25318 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col8a2P25318 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col8a2P25318 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Col8a2P25318 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col8a2P25318 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.94□□□□□ -0.18
Col8a2P25318 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Col8a2P25318 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col8a2P25318 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Gm44450-201ENSMUST00000199528 114 ntBASIC13.94□□□□□ -0.18
Col8a2P25318 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.94□□□□□ -0.18
Col8a2P25318 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col8a2P25318 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.94□□□□□ -0.18
Col8a2P25318 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col8a2P25318 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col8a2P25318 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.93□□□□□ -0.18
Col8a2P25318 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col8a2P25318 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Col8a2P25318 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.93□□□□□ -0.18
Col8a2P25318 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col8a2P25318 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col8a2P25318 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.93□□□□□ -0.18
Col8a2P25318 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.93□□□□□ -0.18
Col8a2P25318 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col8a2P25318 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Col8a2P25318 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms