Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.51□□□□□ -0.09
PtcraP0C6B2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PtcraP0C6B2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Gm26039-201ENSMUST00000158152 144 ntBASIC14.5□□□□□ -0.09
PtcraP0C6B2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Gm44450-201ENSMUST00000199528 114 ntBASIC14.5□□□□□ -0.09
PtcraP0C6B2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PtcraP0C6B2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Gm27389-201ENSMUST00000183622 195 ntBASIC14.49□□□□□ -0.09
PtcraP0C6B2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Phf7-203ENSMUST00000226565 1971 ntBASIC14.49□□□□□ -0.09
PtcraP0C6B2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PtcraP0C6B2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms