Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp9aO70228 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp9aO70228 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp9aO70228 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp9aO70228 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp9aO70228 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Atp9aO70228 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.5■□□□□ 0.55
Atp9aO70228 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atp9aO70228 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.5■□□□□ 0.55
Atp9aO70228 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Atp9aO70228 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.5■□□□□ 0.55
Atp9aO70228 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.5■□□□□ 0.55
Atp9aO70228 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atp9aO70228 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atp9aO70228 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Atp9aO70228 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atp9aO70228 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.49■□□□□ 0.55
Atp9aO70228 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.49■□□□□ 0.55
Atp9aO70228 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.49■□□□□ 0.55
Atp9aO70228 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.49■□□□□ 0.55
Atp9aO70228 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp9aO70228 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp9aO70228 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Atp9aO70228 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp9aO70228 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp9aO70228 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Atp9aO70228 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.48■□□□□ 0.55
Atp9aO70228 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp9aO70228 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp9aO70228 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atp9aO70228 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.48■□□□□ 0.55
Atp9aO70228 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp9aO70228 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Atp9aO70228 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.47■□□□□ 0.55
Atp9aO70228 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.47■□□□□ 0.55
Atp9aO70228 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.47■□□□□ 0.55
Atp9aO70228 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.47■□□□□ 0.55
Atp9aO70228 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Atp9aO70228 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp9aO70228 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Atp9aO70228 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Atp9aO70228 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.46■□□□□ 0.55
Atp9aO70228 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp9aO70228 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atp9aO70228 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp9aO70228 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms