Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sigmar1O55242 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.62□□□□□ -0.55
Sigmar1O55242 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.62□□□□□ -0.55
Sigmar1O55242 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sigmar1O55242 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.61□□□□□ -0.55
Sigmar1O55242 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sigmar1O55242 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sigmar1O55242 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.6□□□□□ -0.55
Sigmar1O55242 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sigmar1O55242 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Sigmar1O55242 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Sigmar1O55242 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.6□□□□□ -0.55
Sigmar1O55242 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sigmar1O55242 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sigmar1O55242 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.59□□□□□ -0.55
Sigmar1O55242 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Sigmar1O55242 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC11.59□□□□□ -0.55
Sigmar1O55242 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC11.59□□□□□ -0.55
Sigmar1O55242 Gm43759-201ENSMUST00000196925 1261 ntBASIC11.59□□□□□ -0.55
Sigmar1O55242 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC11.59□□□□□ -0.55
Sigmar1O55242 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sigmar1O55242 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sigmar1O55242 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sigmar1O55242 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms