Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr6O54689 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr6O54689 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccr6O54689 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr6O54689 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr6O54689 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr6O54689 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr6O54689 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr6O54689 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr6O54689 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr6O54689 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Flg-201ENSMUST00000050758 1488 ntBASIC14.08□□□□□ -0.16
Ccr6O54689 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccr6O54689 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccr6O54689 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccr6O54689 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr6O54689 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.08□□□□□ -0.16
Ccr6O54689 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.07□□□□□ -0.16
Ccr6O54689 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccr6O54689 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccr6O54689 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccr6O54689 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ccr6O54689 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.07□□□□□ -0.16
Ccr6O54689 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccr6O54689 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccr6O54689 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccr6O54689 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccr6O54689 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ccr6O54689 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccr6O54689 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccr6O54689 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccr6O54689 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccr6O54689 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccr6O54689 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccr6O54689 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccr6O54689 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccr6O54689 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.06□□□□□ -0.16
Ccr6O54689 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccr6O54689 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccr6O54689 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccr6O54689 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Mir6349-201ENSMUST00000184059 97 ntBASIC14.05□□□□□ -0.16
Ccr6O54689 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.05□□□□□ -0.16
Ccr6O54689 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccr6O54689 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms