Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.19□□□□□ -0.14
Prrt1O35449 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prrt1O35449 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prrt1O35449 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prrt1O35449 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.19□□□□□ -0.14
Prrt1O35449 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.19□□□□□ -0.14
Prrt1O35449 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Prrt1O35449 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.19□□□□□ -0.14
Prrt1O35449 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.19□□□□□ -0.14
Prrt1O35449 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prrt1O35449 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.19□□□□□ -0.14
Prrt1O35449 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.19□□□□□ -0.14
Prrt1O35449 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prrt1O35449 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 Flg-201ENSMUST00000050758 1488 ntBASIC14.18□□□□□ -0.14
Prrt1O35449 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prrt1O35449 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.18□□□□□ -0.14
Prrt1O35449 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prrt1O35449 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prrt1O35449 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prrt1O35449 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.17□□□□□ -0.14
Prrt1O35449 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Prrt1O35449 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Prrt1O35449 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.17□□□□□ -0.14
Prrt1O35449 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.17□□□□□ -0.14
Prrt1O35449 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.17□□□□□ -0.14
Prrt1O35449 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prrt1O35449 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prrt1O35449 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Prrt1O35449 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Prrt1O35449 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prrt1O35449 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.16□□□□□ -0.14
Prrt1O35449 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Prrt1O35449 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prrt1O35449 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Prrt1O35449 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms