Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Efnb3O35393 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Efnb3O35393 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.25□□□□□ -0.29
Efnb3O35393 Gm12441-201ENSMUST00000121806 588 ntBASIC13.25□□□□□ -0.29
Efnb3O35393 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.25□□□□□ -0.29
Efnb3O35393 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Efnb3O35393 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Efnb3O35393 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Efnb3O35393 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Efnb3O35393 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Efnb3O35393 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Efnb3O35393 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Efnb3O35393 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Efnb3O35393 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Efnb3O35393 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Efnb3O35393 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Efnb3O35393 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Efnb3O35393 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Efnb3O35393 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Efnb3O35393 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Efnb3O35393 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.23□□□□□ -0.29
Efnb3O35393 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Efnb3O35393 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Efnb3O35393 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.23□□□□□ -0.29
Efnb3O35393 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.23□□□□□ -0.29
Efnb3O35393 Gm10138-203ENSMUST00000206952 366 ntBASIC13.23□□□□□ -0.29
Efnb3O35393 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.23□□□□□ -0.29
Efnb3O35393 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Efnb3O35393 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Efnb3O35393 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.23□□□□□ -0.29
Efnb3O35393 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Efnb3O35393 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.23□□□□□ -0.29
Efnb3O35393 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Efnb3O35393 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Efnb3O35393 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.22□□□□□ -0.29
Efnb3O35393 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.22□□□□□ -0.29
Efnb3O35393 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.22□□□□□ -0.29
Efnb3O35393 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.22□□□□□ -0.29
Efnb3O35393 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Efnb3O35393 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Efnb3O35393 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Efnb3O35393 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Efnb3O35393 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.21□□□□□ -0.29
Efnb3O35393 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.21□□□□□ -0.29
Efnb3O35393 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Efnb3O35393 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms