Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.71■□□□□ 0.11
Cx3cl1O35188 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cx3cl1O35188 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cx3cl1O35188 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cx3cl1O35188 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cx3cl1O35188 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cx3cl1O35188 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Gm22697-201ENSMUST00000175194 63 ntBASIC15.7■□□□□ 0.1
Cx3cl1O35188 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Gm18101-201ENSMUST00000215769 548 ntBASIC15.7■□□□□ 0.1
Cx3cl1O35188 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cx3cl1O35188 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cx3cl1O35188 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Gm10013-201ENSMUST00000106074 672 ntBASIC15.68■□□□□ 0.1
Cx3cl1O35188 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms