Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm29791-202ENSMUST00000207888 369 ntBASIC17.2■□□□□ 0.34
Trove2O08848 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.2■□□□□ 0.34
Trove2O08848 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trove2O08848 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trove2O08848 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trove2O08848 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.19■□□□□ 0.34
Trove2O08848 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Mtag2-201ENSMUST00000058665 714 ntBASIC17.19■□□□□ 0.34
Trove2O08848 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.19■□□□□ 0.34
Trove2O08848 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trove2O08848 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trove2O08848 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trove2O08848 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Gm10418-201ENSMUST00000100943 576 ntBASIC17.18■□□□□ 0.34
Trove2O08848 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.18■□□□□ 0.34
Trove2O08848 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.18■□□□□ 0.34
Trove2O08848 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.18■□□□□ 0.34
Trove2O08848 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.18■□□□□ 0.34
Trove2O08848 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trove2O08848 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trove2O08848 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.17■□□□□ 0.34
Trove2O08848 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.17■□□□□ 0.34
Trove2O08848 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.17■□□□□ 0.34
Trove2O08848 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trove2O08848 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Trove2O08848 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.16■□□□□ 0.34
Trove2O08848 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.16■□□□□ 0.34
Trove2O08848 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.16■□□□□ 0.34
Trove2O08848 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Gm10138-203ENSMUST00000206952 366 ntBASIC17.16■□□□□ 0.34
Trove2O08848 Gm20049-201ENSMUST00000219950 730 ntBASIC17.16■□□□□ 0.34
Trove2O08848 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trove2O08848 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trove2O08848 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.15■□□□□ 0.34
Trove2O08848 Gm11249-201ENSMUST00000117071 859 ntBASIC17.15■□□□□ 0.34
Trove2O08848 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
Trove2O08848 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.15■□□□□ 0.34
Trove2O08848 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.15■□□□□ 0.34
Trove2O08848 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trove2O08848 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms