Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.34■□□□□ 0.37
Ebf3O08791 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ebf3O08791 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ebf3O08791 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ebf3O08791 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf3O08791 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf3O08791 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf3O08791 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ebf3O08791 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.33■□□□□ 0.36
Ebf3O08791 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Gm8969-201ENSMUST00000199694 526 ntBASIC17.33■□□□□ 0.36
Ebf3O08791 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.33■□□□□ 0.36
Ebf3O08791 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ebf3O08791 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ebf3O08791 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf3O08791 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ebf3O08791 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Olfr129-201ENSMUST00000122318 993 ntBASIC17.32■□□□□ 0.36
Ebf3O08791 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ebf3O08791 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
Ebf3O08791 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ebf3O08791 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ebf3O08791 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf3O08791 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ebf3O08791 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ebf3O08791 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ebf3O08791 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Gm24589-201ENSMUST00000116692 94 ntBASIC17.31■□□□□ 0.36
Ebf3O08791 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.31■□□□□ 0.36
Ebf3O08791 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.31■□□□□ 0.36
Ebf3O08791 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.31■□□□□ 0.36
Ebf3O08791 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.31■□□□□ 0.36
Ebf3O08791 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ebf3O08791 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf3O08791 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ebf3O08791 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.3■□□□□ 0.36
Ebf3O08791 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ebf3O08791 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.3■□□□□ 0.36
Ebf3O08791 Gm18115-201ENSMUST00000221209 621 ntBASIC17.3■□□□□ 0.36
Ebf3O08791 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ebf3O08791 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.3■□□□□ 0.36
Ebf3O08791 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf3O08791 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ebf3O08791 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms