Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3aO08665 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3aO08665 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3aO08665 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3aO08665 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3aO08665 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sema3aO08665 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sema3aO08665 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Sema3aO08665 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.89■□□□□ 0.29
Sema3aO08665 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
Sema3aO08665 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sema3aO08665 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Sema3aO08665 Gm26039-201ENSMUST00000158152 144 ntBASIC16.89■□□□□ 0.29
Sema3aO08665 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Gm10231-201ENSMUST00000181584 441 ntBASIC16.89■□□□□ 0.29
Sema3aO08665 Gm27389-201ENSMUST00000183622 195 ntBASIC16.89■□□□□ 0.29
Sema3aO08665 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Gm10175-202ENSMUST00000208752 441 ntBASIC16.89■□□□□ 0.29
Sema3aO08665 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sema3aO08665 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.89■□□□□ 0.29
Sema3aO08665 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.89■□□□□ 0.29
Sema3aO08665 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sema3aO08665 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3aO08665 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sema3aO08665 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sema3aO08665 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Gm22697-201ENSMUST00000175194 63 ntBASIC16.88■□□□□ 0.29
Sema3aO08665 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.88■□□□□ 0.29
Sema3aO08665 Mir7071-201ENSMUST00000184847 69 ntBASIC16.88■□□□□ 0.29
Sema3aO08665 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Gm10566-201ENSMUST00000086739 996 ntBASIC16.88■□□□□ 0.29
Sema3aO08665 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Sema3aO08665 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sema3aO08665 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sema3aO08665 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sema3aO08665 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sema3aO08665 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Phf7-203ENSMUST00000226565 1971 ntBASIC16.87■□□□□ 0.29
Sema3aO08665 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sema3aO08665 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sema3aO08665 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sema3aO08665 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sema3aO08665 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.86■□□□□ 0.29
Sema3aO08665 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.86■□□□□ 0.29
Sema3aO08665 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.86■□□□□ 0.29
Sema3aO08665 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.86■□□□□ 0.29
Sema3aO08665 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.86■□□□□ 0.29
Sema3aO08665 Gm21559-201ENSMUST00000220638 855 ntBASIC16.86■□□□□ 0.29
Sema3aO08665 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sema3aO08665 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Gm8587-201ENSMUST00000076538 843 ntBASIC16.86■□□□□ 0.29
Sema3aO08665 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sema3aO08665 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sema3aO08665 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sema3aO08665 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sema3aO08665 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
Sema3aO08665 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sema3aO08665 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms