Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Raet1bO08603 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.82□□□□□ -0.04
Raet1bO08603 Gm11539-201ENSMUST00000119837 557 ntBASIC14.82□□□□□ -0.04
Raet1bO08603 Gm13436-201ENSMUST00000120418 567 ntBASIC14.82□□□□□ -0.04
Raet1bO08603 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.82□□□□□ -0.04
Raet1bO08603 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.82□□□□□ -0.04
Raet1bO08603 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Raet1bO08603 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Raet1bO08603 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1bO08603 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Raet1bO08603 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.81□□□□□ -0.04
Raet1bO08603 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Raet1bO08603 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.81□□□□□ -0.04
Raet1bO08603 Gm2274-201ENSMUST00000184539 609 ntBASIC14.81□□□□□ -0.04
Raet1bO08603 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Gm7370-201ENSMUST00000219471 767 ntBASIC14.81□□□□□ -0.04
Raet1bO08603 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Haglr-201ENSMUST00000100000 2085 ntBASIC14.81□□□□□ -0.04
Raet1bO08603 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1bO08603 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Raet1bO08603 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.8□□□□□ -0.04
Raet1bO08603 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.8□□□□□ -0.04
Raet1bO08603 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Raet1bO08603 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Raet1bO08603 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Raet1bO08603 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Raet1bO08603 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1bO08603 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
Raet1bO08603 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.79□□□□□ -0.04
Raet1bO08603 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.79□□□□□ -0.04
Raet1bO08603 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Raet1bO08603 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.79□□□□□ -0.04
Raet1bO08603 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Raet1bO08603 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Raet1bO08603 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1bO08603 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Raet1bO08603 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Raet1bO08603 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Raet1bO08603 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Raet1bO08603 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.78□□□□□ -0.04
Raet1bO08603 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms