Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.08■□□□□ 0.81
NpcdF8VQB8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NpcdF8VQB8 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.08■□□□□ 0.8
NpcdF8VQB8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
NpcdF8VQB8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
NpcdF8VQB8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NpcdF8VQB8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NpcdF8VQB8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NpcdF8VQB8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NpcdF8VQB8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
NpcdF8VQB8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Gm15920-201ENSMUST00000118998 402 ntBASIC20.07■□□□□ 0.8
NpcdF8VQB8 Gm12260-201ENSMUST00000122447 411 ntBASIC20.07■□□□□ 0.8
NpcdF8VQB8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NpcdF8VQB8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.06■□□□□ 0.8
NpcdF8VQB8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NpcdF8VQB8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NpcdF8VQB8 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.06■□□□□ 0.8
NpcdF8VQB8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Gm29707-201ENSMUST00000196325 491 ntBASIC20.05■□□□□ 0.8
NpcdF8VQB8 Gm5186-201ENSMUST00000218781 920 ntBASIC20.05■□□□□ 0.8
NpcdF8VQB8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.05■□□□□ 0.8
NpcdF8VQB8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NpcdF8VQB8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Gm7230-201ENSMUST00000173026 815 ntBASIC20.04■□□□□ 0.8
NpcdF8VQB8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.04■□□□□ 0.8
NpcdF8VQB8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.04■□□□□ 0.8
NpcdF8VQB8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NpcdF8VQB8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms