Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Gm13216-201ENSMUST00000117145 591 ntBASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4lE9Q2N0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Gm18101-201ENSMUST00000215769 548 ntBASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Gm21559-201ENSMUST00000220638 855 ntBASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Gm18115-201ENSMUST00000221209 621 ntBASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Gm8587-201ENSMUST00000076538 843 ntBASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4lE9Q2N0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Cpsf4lE9Q2N0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.15□□□□□ -0.15
Cpsf4lE9Q2N0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4lE9Q2N0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms