Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Gm12887B1AVM1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Gm12887B1AVM1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm12887B1AVM1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm12887B1AVM1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gm12887B1AVM1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Flg-201ENSMUST00000050758 1488 ntBASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm12887B1AVM1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Gm7291-201ENSMUST00000199147 382 ntBASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm12887B1AVM1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms