Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Gm44492-201ENSMUST00000197012 141 ntBASIC13.56□□□□□ -0.24
Chd6A3KFM7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.56□□□□□ -0.24
Chd6A3KFM7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.55□□□□□ -0.24
Chd6A3KFM7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.55□□□□□ -0.24
Chd6A3KFM7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chd6A3KFM7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Gm7506-201ENSMUST00000207758 815 ntBASIC13.54□□□□□ -0.24
Chd6A3KFM7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.54□□□□□ -0.24
Chd6A3KFM7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chd6A3KFM7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.53□□□□□ -0.24
Chd6A3KFM7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Gm43474-201ENSMUST00000196415 774 ntBASIC13.53□□□□□ -0.24
Chd6A3KFM7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd6A3KFM7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.52□□□□□ -0.24
Chd6A3KFM7 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.52□□□□□ -0.24
Chd6A3KFM7 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.52□□□□□ -0.24
Chd6A3KFM7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd6A3KFM7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chd6A3KFM7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms