Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm29707-201ENSMUST00000196325 491 ntBASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.16■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V3A0A0G2JEW2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm10819-201ENSMUST00000099988 561 ntBASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms