Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Nespas-201ENSMUST00000143738 1083 ntBASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm18671-201ENSMUST00000214826 683 ntBASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms